Review the articleThe role of ontologies in biological and biomedical research: a functional perspective. (Links to an external site.) The outline to structure your review: Introduction: Introduce the...

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Review the articleThe role of ontologies in biological and biomedical research: a functional perspective.(Links to an external site.)The outline to structure your review:



  • Introduction: Introduce the topic and provide necessary background.

  • Review: Provide a summary of the paper. Be sure to discuss what an ontology is, how it can be used, vocabularies, and OWL.

  • Conclusions: Succinctly summarize your main points.

  • Bibliography: List your sources. Use APA format. Be consistent.



Grading


Only peer reviewed articles will be accepted for full credit. The min word count requirement is 600 words, but no more than 1000 words or you will lose points. Cite 2 additional sources in APA format. The report must be prepared in an essay form; not as a list of bullet points. For a grading breakdown, please review the rubric.


Rubric


Assignment Rubric (2)


Assignment Rubric (2)













































CriteriaRatingsPts

This criterion is linked to a learning outcomeName/Font/Formatting













5Pts

Excellent


Includes the student’s name, uses fonts and formatting consistently throughout the report



3Pts

Good


Includes the student’s name, uses fonts and formatting consistently throughout the report



2Pts

Acceptable


Uses different fonts and multiple font sizes or does not include the student’s name/heading



0Pts

Unacceptable


N/A




5pts



This criterion is linked to a learning outcomeLength













10Pts

Excellent


Exceeds by 100 words the minimum word count



3Pts

Good


Meets the minimum word count



2Pts

Acceptable


Does not meet the minimum word count



0Pts

Unacceptable


Does not meet the minimum word count by more than 100 words




10pts



This criterion is linked to a learning outcomeIntroduction













10Pts

Excellent


Presents a detailed background to what the paper is about.



3Pts

Good


Minimally discusses what the paper is about.



2Pts

Acceptable


Introduction does not relate to the paper.



0Pts

Unacceptable


Does not include an introduction




10pts



This criterion is linked to a learning outcomeReview













55Pts

Excellent


Presents a detailed summary on the paper.



3Pts

Good


Presents a summary on the paper.



2Pts

Acceptable


Presents a short summary on the paper.



0Pts

Unacceptable


Does not include a summary.




55pts



This criterion is linked to a learning outcomeBibliography













10Pts

Excellent


Includes a bibliography and in-text citations that are formatted properly. Two additional sources are cited in APA format.



3Pts

Good


Includes a bibliography formatted properly and two additional sources are cited.



2Pts

Acceptable


Includes a bibliography and in-text citations but 1-3 formatting errors are present



0Pts

Unacceptable


Includes a bibliography and in-text citations but 4 f formatting errors are present




10pts



This criterion is linked to a learning outcomeFlow/Clarity of Writing













10Pts

Excellent


Has no grammatical/spelling formatting errors. The text goes from general ideas to specific conclusions. Transitions tie sections/paragraphs together. Writing is crisp, clear, and succinct. The author incorporates the active voice when appropriate. Meaning is explicit.



3Pts

Good


Has minor grammatical/spelling/reference formatting errors. There is a basic flow from one section to the next. Writing is generally clear but unnecessary words are used. Meaning is sometimes hidden. Paragraph or sentence structure is too repetitive.



2Pts

Acceptable


Has major grammatical/spelling errors. References are not formatted properly. There is a basic flow from one section to the next, but not all sections or paragraphs follow in a natural or logical order. Hard to know what the author is trying to express.



0Pts

Unacceptable


Has major grammatical/spelling errors. References are not included. The report appears to have no direction, with sections/paragraph appearing disjointed.




10pts



Total points:100


Answered 2 days AfterSep 28, 2022

Answer To: Review the articleThe role of ontologies in biological and biomedical research: a functional...

Uzma answered on Oct 01 2022
23 Votes
2
Introduction
Biomedical knowledge is fundamentally complex and thus it is challenging in managing and integrating the data in existing databases. To overcome this, biomedical on
tology has come into existence. Ontology in biomedicine was first utilized with the development of gene ontology. Biomedical ontologies play a vital role in the integration of information regarding various model organisms which are acquired under varied conditions and stored in different databases (Schriml et al., 2022). It is a relatively new era in the field of computational biology. Bioinformatics, with the development of ontology technologies, can not only manage the data but can also be related to varied data. The main purpose of a biomedical ontology is to understand the different entities with biomedical significance in reality. Bio-ontology initially structures the knowledge and later compares it to biological research. Moreover, ontologies in biomedical research are most commonly represented in the Web Ontology Language (OWL). Bio-ontologies exhibit different perspectives which involve a content-oriented view and a functional view (Hoehndorf et al., 2015). Content-oriented view deals with particular specific ontologies that are created in biomedicine whereas the functional view deals with enabling a diversity of biomedical applications using ontologies. Herein, we discuss the detailed role of ontology in the field of biomedicine research. Also, how ontologies can be utilized to aid integrative research is also discussed.
Review
A formal manner in which knowledge and its concepts are represented and explained concerning each other is refe
ed to as ontology. Ontology development is vital to provide a formal specification of biomedical knowledge, to differentiate and study varied biological...
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