Thank you so much for your support, this is a Systems Biology RNA sequencing report that is due tomorrow 11.59pm. It requires the access to Galaxy Australia which I will provide shortly.

Thank you so much for your support, this is a Systems Biology RNA sequencing report that is due tomorrow 11.59pm. It requires the access to Galaxy Australia which I will provide shortly.


Microsoft Word - BIOL2499:BIOL2512 2021 Practical Report 2 Assessment details.docx BIOL2499/BIOL2512 2022 Assessment: Practical Report 2 (RNA-Seq) Assessment details – Course: Systems Biology Assessment task and purpose To provide an opportunity for students to demonstrate technical ability in the critical analysis and interpretation of omics data. Course learning outcomes (CLO) This assessment relates to the following CLOs 1. Demonstrate theoretical and technical understanding of Systems Biology (Omics) approaches to the study of biological systems from the level of molecules to cells, tissues, organisms and populations. 2. Critically analyse, interpret and explain omics data. 3. Summarise and synthesize and evaluate primary scientific literature. 4. Communicate clearly and effectively using correct scientific language and conventions. Assessment description / requirements Working as an individual, use the instructions in the practical manual to complete the practical activity for week 6. As an individual, complete the questions relating to the assessment criteria. This assessment will demonstrate a capacity to evaluate complex ideas and concepts in research of omics datasets. Assessment type & weighting This is a summative assessment. This assessment is worth 10% of the total mark for this course. Assessment submission details Deadline: Midnight Sunday the 15th of May Method: Submit the assessment onto CANVAS by the due date. The file format should be Word or pdf. Maximum 1000 words. Grading / performance standards A rubric is available on CANVAS. It outlines the grading and performance standards. Students are encouraged to read the rubric in conjunction with the assessment description. The Discussion Board provides opportunities for Q&A about grading and performance throughout the assessment period. Assessment preparation/ Resources https://usegalaxy.org.au/ Assessment feedback A rubric will be used to grade individual performance. Assessment feedback will be provided to individuals on CANVAS at the conclusion of the marking period. Students can ask for input (feedback) throughout the assessment period using the Discussion Board’s Q&A. In addition, at the conclusion of the marking period, video feedback addressing the strengths and weaknesses of all students’ performance (collective feedback) will be provided. Indicators of authentic and blended assessment Authentic in this assessment • Relates to world-wide trends e.g. commonly used techniques in systems biology • Requires students to use technology in a practical context Blended in this assessment • Digital technology Microsoft Word - BIOL2499:BIOL2512 2021 Practical Report 2 Assessment details.docx BIOL2499/BIOL2512 2022 Assessment: Practical Report 2 (RNA-Seq) Assessment details – Course: Systems Biology Assessment task and purpose To provide an opportunity for students to demonstrate technical ability in the critical analysis and interpretation of omics data. Course learning outcomes (CLO) This assessment relates to the following CLOs 1. Demonstrate theoretical and technical understanding of Systems Biology (Omics) approaches to the study of biological systems from the level of molecules to cells, tissues, organisms and populations. 2. Critically analyse, interpret and explain omics data. 3. Summarise and synthesize and evaluate primary scientific literature. 4. Communicate clearly and effectively using correct scientific language and conventions. Assessment description / requirements Working as an individual, use the instructions in the practical manual to complete the practical activity for week 6. As an individual, complete the questions relating to the assessment criteria. This assessment will demonstrate a capacity to evaluate complex ideas and concepts in research of omics datasets. Assessment type & weighting This is a summative assessment. This assessment is worth 10% of the total mark for this course. Assessment submission details Deadline: Midnight Sunday the 15th of May Method: Submit the assessment onto CANVAS by the due date. The file format should be Word or pdf. Maximum 1000 words. Grading / performance standards A rubric is available on CANVAS. It outlines the grading and performance standards. Students are encouraged to read the rubric in conjunction with the assessment description. The Discussion Board provides opportunities for Q&A about grading and performance throughout the assessment period. Assessment preparation/ Resources https://usegalaxy.org.au/ Assessment feedback A rubric will be used to grade individual performance. Assessment feedback will be provided to individuals on CANVAS at the conclusion of the marking period. Students can ask for input (feedback) throughout the assessment period using the Discussion Board’s Q&A. In addition, at the conclusion of the marking period, video feedback addressing the strengths and weaknesses of all students’ performance (collective feedback) will be provided. Indicators of authentic and blended assessment Authentic in this assessment • Relates to world-wide trends e.g. commonly used techniques in systems biology • Requires students to use technology in a practical context Blended in this assessment • Digital technology Microsoft Word - BIOL2499:BIOL2512 2022 Practical Report 2 Assessment Guidelines.docx BIOL2499/BIOL2512 Systems Biology – Practical Report 2 1 BIOL2499/BIOL2512 Practical Report 2 Use your results from Practical Activity 2: RNA-Seq: Differential Gene Expression (week 6) to complete this assessment using a standard practical report structure: Introduction (brief), Aim, Results, Methods (just refer to the practical manual in this section) and Discussion. The focus should be on the results and discussion sections. Maximum 1000 words (not including references and figure legends) Include answers to the following questions in the results section of your report: The Importance of Replicates: How many differentially expressed genes with adjusted p-value < 0.05="" are="" there?="" how="" many="" differentially="" expressed="" genes="" can="" you="" identify="" using="" 2="" samples="" in="" each="" group="" and="" an="" adjusted="" p-value="" of=""><0.05? how="" many="" differentially="" expressed="" genes="" can="" you="" identify="" using="" only="" 1="" sample="" in="" each="" group="" and="" an="" adjusted="" p-value="" of=""><0.05? include answers to the following questions in the discussion section of your report: alignment of reads from rna-seq: what is the major challenge faced when aligning reads from an rna-seq experiment to a reference genome sequence? how is this challenge overcome? the importance of replicates: use your results to explain why it is important to have biological replicates in an rna-seq experiment. include="" answers="" to="" the="" following="" questions="" in="" the="" discussion="" section="" of="" your="" report:="" alignment="" of="" reads="" from="" rna-seq:="" what="" is="" the="" major="" challenge="" faced="" when="" aligning="" reads="" from="" an="" rna-seq="" experiment="" to="" a="" reference="" genome="" sequence?="" how="" is="" this="" challenge="" overcome?="" the="" importance="" of="" replicates:="" use="" your="" results="" to="" explain="" why="" it="" is="" important="" to="" have="" biological="" replicates="" in="" an="" rna-seq="">